Search
Structural elements
Secondary structures
Help
About
References
Links
You are
4274056
visitor.
Currently
9
users online.
Supported by:
Institute of Computing Science
,
Poznan University of Technology
Institute of Bioorganic Chemistry
,
Polish Academy of Sciences
Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
3ZN7
NA2308
A, V, W, X, Y
1
RIBOSOME
X-Ray Difraction
3.1
2013-02-13
model 1
>strand_A
UUUGUuGGAGAGUUUGAUCCUGGCUCAGGGUGAACGCUGGCGGCGUGCCUAAGACAUGCAAGUCGUGCGGGCCGCGGGGUUUUACUCCGUGGUCAGCGGCGGACGGGUGAGUAACGCGUGGGUGACCUACCCGGAAGAGGGGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACCCGCCCCUUGGGGUGUGUCCAAAGGGCUUUGCCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCGGUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGCGCAAGCCUGACGGAGCGACGCCGCUUGGAGGAAGAAGCCCUUCGGGGUGUAAACUCCUGAACCCGGGACGAAACCCCCGACGAGGGGACUGACGGUACCGGGGUAAUAGCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGGCGUGUAGGCGGCCUGGGGCGUCCCAUGUGAAAGACCACGGCUCAACCGUGGGGGAGCGUGGGAUACGCUCAGGCUAGACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGAUGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACCGGAUUAGAUACCCGGGUAGUCCACGCCCUAAACGAUGCGCGCUAGGUCUCUGGGUCUCCUGGGGGCCGAAGCUAACGCGUUAAGCGCGCCGCCUGGGGAGUACGGCCGCAAGGCUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAGGCCUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCACAGGUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGGGACUGCCCGCGAAAGCGGGAGGAAGGAGGGGACGACGUCUGGUCAGCAUGGCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCCCACUACAAAGCGAUGCCACCCGGCAACGGGGAGCUAAUCGCAAAAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCCGACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUCAGCCAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAACAAGGUAGCUGUACCGGAAGGUGCGGCUGGAUCACCUCCUUUCU
-----....((((..[.[[[..)))).((((.(((((..((.((((((....((..(((..(((..((.(((((((...........))))))).)))))......(((......((((((((..((...((.(....(((((....((((((....)))))).....)))))....((.(.(((........))).).))......(...).......).))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(.(((............))).).(((......)))...))).)).).....(.((....(.............).))).)).))).))...(((......((........)).....)))......((((...(.....(.........)......)....)))).......(((((.[[...(((((.....((.]].)).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((..(((((((.(......((((((.....))))))....).))))))..).)))))))..((((((((....(((((((.....((.(((....((........)).......))).))............((....)).)))))))...)))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(.((((((((...)))))))).)...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((.(..(((((((.((......((........))...........(..(.(..(...(..((.......((.((....)).))......................))..))..(.(((....((....(....((((((((......))..((((......))))..)))))).....(.((.((((.(....(..............)......).))))......((........)).........)).).....).....)...)..)))).....).)..)....))..))))))).(...(((((((.....((.......(.((....)).).........)).....)))))))......(....((.((((........)))).))....)..)..).))).....(((((((..........)))))))......))...)))))))))).))..(.(..((.(..(((..((..(((((((((((((...(..(((....(((....))).)))..)..)))))))))))))..))..)))...).))...)..)..(((((((((....)))))))))}..-------------
>strand_V
gGGCCCUUAGCUUAGUCUGGUUAAAGCGAUCGGCUcAUAACCGAUUGGGCGCUGGUUCGAAUCCGGCAGGGCCCACCA
.((..((....((..........))...(((((...[[..)))))......((((.......)))).))..)).....
>strand_W
gGGCCCUUAGCUUAGUCUGGUUAAAGCGAUCGGCUCAUAACCGAUUGGGCGCUGGUUCGAAUCCGGCAGGGCCCACCA
..(........(.............)..(((...........))).......(((.......))).......).....
>strand_X
GGCAAGGAGGUAaAAAUAAUAAAA
------------...]].[[....
>strand_Y
gGGCCCUUAGCUUAGUCUGGUUAAAGCGAUCGGCUcAUAACCGAUUGGGCGCUGGUUCGAAUCCGGCAGGGCCCACCA
...((.(.....(......{...)...((((((...]]..)))))).....(.((..}....)).).).)).......
