RNA FRABASE - RNA FRAgments search engine & dataBASE

Sequence & secondary structure in dot-bracket notation

PDB id	NDB id	Strands	Number of models	Functional class	Experimental method	Resolution [Å]	PDB deposition
3J80		2	1	RIBOSOME	Electron Microscopy	3.75	2014-08-28

model 1

>strand_2
uAUCUGGUUGAUCCUGCCAGUAGUCAUAUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUCUAAGUAUAAGCAAUUUAUACAGUGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUCGUUUAUUUGAUAGUUCCUUUACUACAUGGAUAUCUGUGGUAAUUCUAGAGCUAAUACAUGCUUAAAAUCUCGACCCUUUGGAAGAGAUGUAUUUAUUAGAUAAAAAAUCAAUGUCUUCGGACUCCUUGAUGAUUCAUAAUAACUUUUCGAAUCGCAUGGCCUUGUGCUGGCGAUGGUUCAUUCAAAUUUCUGCCCUAUCAACUUUCGAUGGUAGGAUAGUGGCCUACCAUGGUUUCAACGGGUAACGGGGAAUAAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAACGGCUACCACAUCCAAGGAAGGCAGCAGGCGCGCAAAUUACCCAAUCCUAAUUCAGGGAGGUAGUGACAAUAAAUAACGAUACAGGGCCCAUUCGGGUCUUGUAAUUGGAAUGAGUACAAUGUAAAUACCUUAACGAGGAACAACUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAGUAGCGUAUAUUAAAGUUGUUGCAGUUAAAAAGCUCGUAGUUGAACUUUGGGUCUGGUUGUCCGGUCCGACUUUAUGUCGCGCACUGGUUUUUCAACCGGAUCUUUCCUUCUGGCUAACCUGUACUCCUUGUGGGUGCAGGCGAACCAGGACUUUUACUUUGAAAAAAUUAGAGUGUUCAAAGCAGGCGAAAGCUCGAAUAUAUUAGCAUGGAAUAAUGGAAUAGGACGUUUGGUUCUAUUUUGUUGGUUUCUAGGACCAUCGUAAUGAUUAAUAGGGACGGUCGGGGGCAUCAGUAUUCAAUUGUCAGAGGUGAAAUUCUUGGAUUUAUUGAAGACUAACUACUGCGAAAGCAUUUGCCAAGGACGUUUUCAUUAAUCAAGAACGAAAGUUAGGGGAUCGAAGAUGAUCAGAUACCGUCGUAGUCUUAACCAUAAACUAUGCCGACUAGGGAUCGGGUGGUGUUUUUCUUAUGACCCACUCGGCACCUUACGAGAAAUCAAAGUCUUUGGGUUCUGGGGGGAGUAUGGUCGCAAGGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCUGCGGCUUAAUUUGACUCAACACGGGGAAACUCACCAGGUCCAGACACAAUAAGGAUUGACAGAUUGAGAGCUCUUUCUUGAUUUUGUGGGUGGUGGUGCAUGGCCGUUCUUAGUUGGUGGAGUGAUUUGUCUGCUUAAUUGCGAUAACGAACGAGACCUUAACCUACUAAAUAGGGUUGCUGGCACUUGCCGGUUGACUCUUCUUAGAGGGACUAUCGGUUUCAAGCCGAUGGAAGUUUGAGGCAAUAACAGGUCUGUGAUGCCCUUAGACGUUCUGGGCCGCACGCGCGCUACACUGACGGAGCCAGCGAGUACAACCUUGGCCGAGAGGUCUGGGUAAUCUUGUGAAACUCCGUCGUGCUGGGGAUAGAGCAUUGUAAUUAUUGCUCUUCAACGAGGAAUUCCUAGUAAGCGCAAGUCAUCAGCUUGCGUUGAUUACGUCCCUGCCCUUUGUACACACCGCCCGUCGCUAGUACCGAUUGAAUGGCUUAGUGAGGCCUCAGGAUUUGCUUAGAGAUCUCAGAGCGAAGAAUCUGGUCAAACUUGGUCAUUUAGAGGAACUAAAAGUCGUAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUA
...((((..[.[[[..))))((((.((((((.....(...((.....(((.(((..((....((....((..........))...)){))......(((.......(((..((...(....((((.................(.....(.(.........).).......).........(.(((..((....))..))).)(.(.((((((......[[.[[[.[(((....))).....(......).)))))).)...).(.((((..(((.....))).))))).).)))...).))..))).(((....(((....((((((((.......)))))))))))......)))...(((.((((....))))....)))))).((.(.(..........).).)).(.((....)).)...)))))).).....(.(((...((((.}...))).))))).)....)........(.....((..((....))..))......).......(...................).........(((...[......((((.....((..].)).......))))...)))..))))))))))..{......((({......(.((...(((.((.......((((((((......(-------------------)......))))))))........((.((...............................)).))....(((...((.......((..((.......)).(((....)))....))......)).....)))........((......((.(((....].]]].]].))).)).....)..)..))....(((.((..(...(((...((..((((((.(...((........))......).))))))..)).......((....))....)))..)..))..)))...)))...)).)....(((((.........((((.........))))......)))))......<...(((.(..(((..(((((.((.((..........)))).)))))..)))...((...}))....)...}.))).))).(((........((....))......)))...]]].](((((.((.((((..((..(((((..(((.((((((......((........))..........(((((.(....(.((....................................)).)...((.(((...(.((((((....(((.(.(((....)))..(.((......)))....).)))....(((((.((..(.((..((((((((((((....)))))).))))))..)).).))..(.(((.(........))))....)..)))))....))).))).....).))))).....).)))))...)).)))).))).(...(((((((......((.....((...(((....)))...))....)).......)))))))......(.....((.((..........)).)).....)..)..))))).....((((((((.......))))))))......))...)))).))))).))..(.(..((.(..((((.((..(.....((...(((..(((...(...((((....(....................)....))))...)...)))..)))...))....)..)).))))...).))...)..)..(((((((((....))))