You are 4274069 visitor.
Currently 9 users online.


Sequence & secondary structure in dot-bracket notation
       
 PDB id   NDB id  Strands     Number of models     Functional class     Experimental method     Resolution [Å]     PDB deposition
3J7Y A, B1RIBOSOMEElectron Microscopy3.42014-08-26

model 1
>strand_A
gCUAAACCUAGCCCCAAACCCACUCCACCUUACUACCAGCAACCUUAGCCAAACCAUUUACAUAAAGUAUAGGCGAUAGAAAUUGUGGCGCAAUAGAUAUAGUACCGCAAGGGAAAGAUGAAAAAUUAUAACCAAGCAUAAUAUAGCAAGGACUAACCCCUAUACCUUCUGCAUAAUGAAUUAACUAGAAAUAACUUUGCAAGGAGAGCCAAAGCUAAGACCCCCGAAACCAGACGAGCUACCUAAGAACAGCUAAGAGCACACCCGUCUAUGUAGCAAAAUAGUGGGAAGAUUUAUAGGUAGAGGCGACAAACCUACCGAGCCUGGUGAUAGCUGGUUGUCCAAGAUAGAAUCUUAGUUCAACUUUAAAUUUGCCCACAGAACCAAAUCCCCUUGUAAAUUUAACUGUUAGUCCAAAGAGGAACAGCUCUUUGGACACUAGGAAAAAACCUUGUAGAGAGAGUAAAAAAUUUAACACCCAUAGUAGGCCUAAAAGCAGCCACCAAUUAAGAAAGCGUUCAAGCUCAACACCAAAAAUCCCAAACAUAUAACUGAACUCCUCACACCCAAUUGGACCAAUCUAUCACCCUAUAGAAGAACUAAUGUUAGUAUAAGUAACAUGAAAACAUUCUCCUCCGCAUAAGCCUGCGUCAGAUCACACUGACAAUUAACAGCCCAAUAUCUACAAUCAACCAACAAGUCAUUAUUACCCUCACUGUCAACCCAACACAGGCAUGCUCAUAAGGAAAGGUUAAAAAAAGUAAAAGGAACUCGGCAAAUCUUACCCCGCCUGUUUACCAAAAACAUCACCUCUAGCAUCACCAGUAUUAGAGGCACCGCCUGCCCAGUGACACAUGUUUAACGGCCGCGGUUAACCGUGCAAAGGUAGCAUAAUCACUUGUUCCUUAAAUAGGGACCUGUAUGAAUGGCUCCACGAGGGUUCAGCUGUCUCUUACUUUUAACCAGUGAAAUUGACCUGCCCGUGAAGAGGCGGGCAUAACACAGCAAGACGAGAAGACCCUAUGGAGCUUUAAUUUAUUAAUGCAAACAGUAACCUGCAUUAAAAAUUUCGGUUGGGGCGACCUCGGAGCAGAACCCAACCUCCGAGCAGUACAUGCUAAGACUUCACCAGUCAAAGCGAACCUCAAUUGAUCCAAUAACUUGACCAACGGAACAAGUUACCCUAGGGAUAACAGCGCAAUCCUAUUCUAGAGUCCAUAUCAACAAUAGGGUUUACGACCUCGAUGUUGGAUCAGGACAUCCCGAUGGUGCAGCCGCUAUUAAAGGUUCGUUUGUUCAACGAUUAAAGUCCUACGUGAUCUGAGUUCAGACCGGAGUAAUCCAGGUCGGUUUCUAUCUACUUUAUUCCUCCCUGUACGAAAGGACAAGAGAAAUAAGGCCUACUUCACAAAGCGCCUUCCCCCGUAAAUGAUAUCAUCUCAACUUAGAUACCCACACCCAAGAACAGGGUU
((.....(..((((....................................(...[..).....(.....((.]...))....)...)).)).............((....))....)..................)).........(.(((.......))).[.(.(........).).((((.(..........(..((..((....))...)).).....((.(...((((.(.....(((((.((.(.(((..[)))...(((..((((.......{)))).)))..)..)).))))).(.((.......))...)..).))))......).))..((((((....((.(....)).).((.((((((((((.....((......)).....))))))))))..))..((((((((((......))))))))))...(((......)))....(((.(((...(..............(.(...((.........))...).)....(..((........)))..........................)...))))))........))))))...(((((......))))).........)).)))(......((..(((....)))(((...((((......(.(((((......)))))......(((...((((...............(..)....)))).......))).)...((......)).))))......)))..((((....((((.(..((..(....(........((((((.].((.........))....((((((.............))))))....(((.(((..(((((....)))..)))))(((((....)))))........((..........(((((.......)))))..)..)....)))....)).))))....)..))).)..)))).)))).)).....)).{..(((((.....]}.))))).......((..(((.((......((((.((((((..(((((.(((.((((..........))))).)))))))..(((......[)))((((((..........]))))))(.((.....((...(((....[..)))...))....)).........(((....))).....)].....))))..)))))).......(((..(.((((((.(.((.......)))..))))))...).)).)........((((.((((((..((.((((((......))))))...)).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..}.))..))).))..(((.(((......(....).....))).)))(((((...(((....))).)))))......(((................))).........((((.......)))).
>strand_B
CAGAGUGUAGCUUAAAAGCACCCAACUUACACUUAGGAGAUUCAAUUGACGCUCUGA
(((((((..(((....))).((.((.......)).))....(((())))))))))).