RNA FRABASE - RNA FRAgments search engine & dataBASE

Sequence & secondary structure in dot-bracket notation

PDB id	NDB id	Strands	Number of models	Functional class	Experimental method	Resolution [Å]	PDB deposition
2Y9D	NA1108	V, X, Y	1	SPLICING/RNA	X-Ray Difraction	3.6	2011-02-13

model 1

>strand_V
gCCGUGACGACUGAAAAGUCGGCAUUGGCAAUUUUUGACAGUCUCUAUGGGUAACCUAAGGAGACUGG
((.(((.(((((....))))).))).).)..........(((((....((....)).....)))))..

>strand_X
gCCGUGACGACUGAAAAGUCGGCAUUGGCAAUUUUUGACAGUCUCUAUGGGUAACCUAAGGAGACUGG
...(((..((((....))))..)))..............(((((((..((....))...)))))))..

>strand_Y
gCCGUGACGACUGAAAAGUCGGCAUUGGCAAUUUUUGACAGUCUCUAUGGGUAACCUAAGGAGACUGG
.(.(((.(((((....))))).)))..)...........(((.(((..((....))...))).)))..