You are 4274055 visitor.
Currently 10 users online.


Sequence & secondary structure in dot-bracket notation
       
 PDB id   NDB id  Strands     Number of models     Functional class     Experimental method     Resolution [Å]     PDB deposition
2V49 2V49 A, B1RIBOSOMEX-Ray Difraction3.82007-06-28


model 1
>strand_A
GGUCAaGAUGGUAAGGGCCCACGGUGGAUGCCUCGGCACCCGAGCCGAUGAAGGACGUGGCUACCUGCGAUAAGCCAGGGGGAGCCGGUAGCGGGCGUGGAUCCCUGGAUGUCCGAAUGGGGGAACCCGGCCGGCGGGAACGCCGGUCACCGCGCUUGCGCGGGGGGAACCUGGGGAACUGAAACAUCUCAGUACCCAGAGGAGAGGAAAGAGAAAUCGACUCCCUGAGUAGCGGCGAGCGAAAGGGGACCAGCCUAAACCGUCCGGCUUGUCCGGGCGGGGUCGGGGGCCCUCGGCCGAAUCCCCAGCCUAGCCGAAGCUGUUGGGAAGCAGCGCCAGAGAGGGUGAAAGCCCCGUAGGCGAAAGGUGGGGGGAUAGGUGAGGGUACCCGAGUACCCCGUGGUUCGUGGAGCCAUGGGGGAAUCUGGGCGGACCACCGCCUAAGGCUAAGUACUCCGGGUGACCGAUAGCGCACCAGUACCGUGAGGGAAAGGUGAAAAGAACCCCGGGAGGGGAGUGAAAUAGAGCCUGAAACCGUGGGCUUACAAGCAGUCACGGCCCCAAGGGGUUGUGGCGUGCCUAUUGAAGCAUGAGCCGGCGACUCACGGUCGUGGGCGAGCUUAAGCCGUUGAGGCGGAGGCGUAGGGAAACCGAGUCCGAACAGGGCGCGUCCGCGGCCGUGGACCCGAAACCGGGCGAGCUAGCCCUGGCCAGGGUGAAGCUGGGGUGAGACCCAGUGGAGGCCCGAACCGGUGGGGGAUGCAAACCCCUCGGAUGAGCUGGGGCUAGGAGUGAAAAGCUAACCGAGCCCGGAGAUAGCUGGUUCUCCCCGAAAUGACUUUAGGGUCAGCCUCAGGCGCUGACUGGGGCCUGUAGAGCACUGAUAGGGCUAGGGGGCGCCUACCAAACCCUGUCAAACUCCGAAGGGUCCCAGGUGGAGCCUGGGAGUGAGGGCGCGAGCGAUAACGUCCGCGUCCGAGCGCGGGAACAACCGAGACCGCCAGCUAAGGCCCCCAAGUCUGGGCUAAGUGGUAAAGGAUGUGGCGCCGCGAAGACAGCCAGUCGAGUGGCGCCGCGCCGAAAAUGAUCGGGGCUUAAGCCCAGCGCCGAAGCUGCGGGUCUGGGGGAUGACCCCAGGCGGUAGGGGAGCGUUCCCGAUGCCGAUGAAGGCCGACCCGCGAGGGCGGCUGGAGGUAAGGGAAGUGCGAAUGCCGGCAUGAGUAACGAUAAAGAGGGUGAGAAUCCCUCUCGCCGUAAGCCCAAGGGUUCCUACGCAAUGGUCGUCAGCGUAGGGUUAGGCGGGACCUAAGGUGAAGCCGAAAGGCGUAGCCGAAGGGCAGCCGGUUAAUAUUCCGGCCCUUCCCGCAGGUGCGAUGGGGGGACGCUCUAGGCUAGGGGGACCGGAGCCAUGGACGAGCCCGGCCAGAAGCGCAGGGUGGGAGGUAGGCAAAUCCGCCUCCCAACAAGCUCUGCGUGGUGGGGAAGCCCGCAACCCCCCGAAGCCAGGGAGCCAAGAAAAGCCUCUAAGCACAACCUGCGGGAACCCGUACCGCAAACCGACACAGGUGGGCGGGUGCAAGAGCACUCAGGCGCGCGGGAGAACCCUCGCCAAGGAACUCUGCAAGUUGGCCCCGUAACUUCGGGAGAAGGGGUGCUCCCUGGGGUGAUGAGCCCCGGGGAGCCGCAGUGAACAGGCUCUGGCGACUGUUUACCAAAAACACAGCUCUCUGCGAACUCGUAAGAGGAGGUAUAGGGAGCGACGCUUGCCCGGUGCCGGAAGGUCAAGGGGAGGGGUGCAAGCCCCGAACCGAAGCCCCGGUGAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAAAGCGUAACGACCGGAGCGCUGUCUCGGCGAGGGACCCGGUGAAAUUGAACUGGCCGUGAAGAUGCGGCCUACCCGUGGCAGGACGAAAAGACCCCGUGGAGCUUUACUGCAGCCUGGUGUUGGCUCUUGGUCGCGCCUGCGUAGGAUAGGUGGGAGCCCGGUGAAAUACCACCCUGGCGCGGCUGGGGGCCUAACCCUCGGAUGGGGGGACAGCGCUUGGCGGGCAGUUUGACUGGGGCGGUCGCCUCCUAAAAGGUAACGGAGGCGCCCAAAGGUCCCCUCAGGCGGGACGGAAAUCCGCCGGAGAGCGCAAGGGUAGAAGGGGGCCUGACUGCGAGGCCUGCAAGCCGAGCAGGGGCGAAAGCCGGGCCUAGUGAACCGGUGGUCCCGUGUGGAAGGGCCAUCGAUCAACGGAUAAAAGUUACCCCGGGGAUAACAGGCUGAUCUCCCCCGAGCGUCCACAGCGGCGGGGAGGUUUGGCACCUCGAUGUCGGCUCGUCGCAUCCUGGGGCUGAAGAAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGCACGCGAGCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCUCUAUCCGCCACGGGCGCAGGAGGCUUGAGGGGGGCUCUUCCUAGUACGAGAGGACCGGAAGGGACGCACCUCUGGUUUCCCAGCUGUCCCUCCAGGGGCAUAAGCUGGGUAGCCAUGUGCGGAAGGGAUAACCGCUGAAAGCAUCUAAGCGGGAAGCCCGCCCCAAGAUGAGGCCUCCCACGGCGUCAAGCCGGUAAGGACCCGGGAAGACCACCCGGUGGAUGGGCCGGGGGUGUAAGCGCCGCGAGGCGUUGAGCCGACCGGUCCCAAUCGUCCGAGGUCUUGACCCCUCC
-----.........(..(((((((.....(((..((((((((((.(......((((((.[...[[.)))....(((((((...((.]]...]..))......)))))).).)))....(((....)))((..((((....))))..)).((.((....)).)).)....((((((.........[.........))))).).........((....))...((.((.....((.]...))....)).))...((((...(((((((.......)))))))......(((.(((....(.......(.((.(...(...(((((......)))))[.(...).(((......])))...).....).))..)......)...))).).)).)....(((((((...[.......)))))))......(((((].[[[[)))))..)))......)).)))))).))...............(......)....))......(..((((....))))............)).....)))))))..).....(.(((((((.((....)).)))))))...(............).(..(((....(((((((((((((..(((...(.(.....).)...)))...((....))...(((.....)))...)))))))))))))..((.(....(((((......((...((((.(.((...((((((......))))))...).).)...(((..((((........)))).)))..).)))...))..(.(((.....)))...)..))))).......).))...(((((....(((((....)))))((((((((..(...(.((.((.(...(((...(((.((((.(.....(....)...)..)))).)))..)).)...).)).)).)..)...)))))).))...((((((.((......)).))))))......(((......)))...(.((.(((...(.([.[...(.(...((.....(.....((..(((((..........................))))).))..........].].)....))...))).)...))))).)(((((...........)))))....)))))...(((((...(((......(..((.((......))))..)...)))..)))))........)))..)(......((.....((((((.......))))))((((....((((...(..(((((((.............))))))....[[((((......(((...(((....)))...)))........(((((........)))))]](((((((((((((...(..(....(((((.(((..(.(((.((((.((...{{....)))))).(....((((((.((.(..(.(.((.....)))..)..).....)).))))))...).(...........)))).)...)))..)))))(..).....)..)...))...))))))))))))))).))......((......)).))))..(((......)))...))))..((((....(((((((..((..(....(........((((....(.[..).....)))).((.((.(((...........))).)).))(...).......(((((((((...((.........))...(((((((.....(((....))).......))))))).]((((.(((..(((((((..(((...((...(((.(....).)))...))...))))))))..)))))(..((.........))..)........((..........((((((.....))))))..)..)....))))...)).))))))).)..)))..))))))).)))))).....)).[..((((.......]..))))..((((((((.((..........(.((.((((((..(((((.(((.(((((.(((((((((.(..((..(...........(((...............)))..)..))..).)))))))))...(((((....)))))....))))).)))..)))))..(((......[)))(((.((..........])).)))([(.....((((.(...((((...........)))).....((][...[))....).))))....(..(..(((...{..)))..)..)..((....))...)]...].....(((((...((..]]]]..))..))))).....)}......))))..)))).)......((((..(.((((((...((.......))...))))))...).)).).)......((((.((((((..(((((((((......))))))..))).(((.(.....).))).....)))))..)...))).).....(((((((....))).)))).........))))))))))[...(((((((...((((..(((((((...............))))))).(...(...(..(...(.(.((((.((.}}.)).)))...).).)...)..).)...)...(((....((((.............))))....))).))))..]....)))))))...(.........).....(((((((((.......)))))....((((((((..((....(((.(....).)))...))...))))).)))...)))).......----------
>strand_B
uCCCCCGUGCCCAUAGCGGCGUGGAACCACCCGUUCCCAUUCCGAACACGGAAGUGAAACGCGCCAGCGCCGAUGGUACUGGGCGGGCGACCGCCUGGGAGAGUAGGUCGGUGCGGGGGAUU
..(..((((((.....((((..(....(((..((...(.....)...))....)))...)..))).).(((.......((...((......))...)).......))).))))))..).---