RNA FRABASE - RNA FRAgments search engine & dataBASE

Sequence & secondary structure in dot-bracket notation

PDB id	NDB id	Strands	Number of models	Functional class	Experimental method	Resolution [Å]	PDB deposition
1VOQ	RR0085	A	1	RIBOSOME	X-Ray Difraction	11.5	2004-10-06

model 1

>strand_A
uGGAGAGUUUGAUCCUGGCUCAGGGUGAACGCUGGCGGCGUGCCUAAGACAUGCAAGUCGUGCGGAUACGCGCGGCCCCUUGGGGCCGUGCGUCAGCGGCGGACGGGUGAGUAACGCGUGGGUGACCUACCCGGAAGAGGGGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACGCAAGUCCAAAGGGGGAAGCCUUCGGGUCCCCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCGGUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGCGCAAGCCUGACGGAGCGACGCCGCUUGGAGGAAGAAGCCCUUCGGGGUGUAAACUCCUGAACCCGGGACGAAACCAGGGCCACUCAUACUGGCUCUGACUGACGGUACCGGGGUAAUAGCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGGCGUGUAGGCGGCCUGGGGCGUCCCAUGUGAAAGACCACGGCUCAACCGUGGGGGAGCGUGGGAUACGCUCAGGCUAGACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGAUGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACCGGAUUAGAUACCCGGGUAGUCCACGCCCUAAACGAUGCGCGCUAGGUCUCUGGCGGCUCAACCGCUGGGGGCCGAAGCUAACGCGUUAAGCGCGCCGCCUGGGGAGUACGGCCGCAAGGCUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAGGCCUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCUUCGGGAGCCCUAGCACAGGUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGGGACUGCCCGCGAAAGCGGGAGGAAGGAGGGGACGACGUCUGGUCAGCAUGGCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCCCACUACAAAGCGAUGCCACCCGGCAACGGGGAGCUAAUCGCAAAAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCCGACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUCAGCCAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGUAACCUACGGGAAGAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAACAAGGUAGCUGUACCGGAAGGUGCGGCUGGAUCA
......[[..(.(((..]]...((...(((((..(((((.(((....((..((...(((..((.....((.((..((......))..)).))...)))))......((........(((((((..((...(....((.....(....(((..........))).....)..........((....))........((............))....))....)..))))))))).(((....(.......(.(..........)..).....)......)))..(.(.((((....))))....).).)).(((((............)))))...((....))......)).)).).....(.((....(((((....)))).).))).))..)))))...(((......(..........).....))).....(..((...........(.(.(.......).).).............))..)......(((((..[.....((......(..]...)........))..)))))..)))))..))..........((.[......((((...(.(.(.(((((...((..(((..........(((.....)))........)))..))....))))).)..(((.(.(.(...(.(((.((....(((((.....((........))........)))))....)........(....)..).))).)..).).)..))..)).)...))))....(((((....((...(.((.........)).)...)).)))))......{...(((.((..((((((((.............))))))))...((...])).....)).)))..)).(((......((........))....)))...))).).((((...((..(..(..((((...((((((.(.(......((........))............((((.......(((((..........((....)).........(....)......)))))..(...((....(((.(.(....(((((((((....)))...(((......)))...)))))).....((((.((((...........((.....))..........)))).....(.(((....))).)........)))).....).)..))...)..))..).....))))....[)..).)))))).(....((((((.....(.(...(..(.((....)).)..).....).).....)))))).......(.....(((..............))).....)..)...)))).....(((((((......]...)))))))......)....)..))..))).)...(.(..((.(..(((.(((..(.(.((..((((....(.((((..................)))).)...))))..)).).)..))).)))...).))...)..)..(.(((((.(....).))))).)}.....