RNA FRABASE - RNA FRAgments search engine & dataBASE

Sequence & secondary structure in dot-bracket notation

PDB id	NDB id	Strands	Number of models	Functional class	Experimental method	Resolution [Å]	PDB deposition
1M5O	PR0075	A, B, D, E	1	TRANSLATION/RNA	X-Ray Difraction	2.2	2002-07-09

model 1

>strand_A
gGCCACCUGACagUCCUCUCC
.((((((.(((.[..((((((

>strand_B
gGAGAGAGAAGUCAACCAGAGAAACACACCAACCCAUUGCACUCCGGGUUGGUGGUAUAUUACCUGGUACGGGGGAAACUUCGUGGUGGCCG
))))))....))).(((((.....].(((((((((..........))))))))).........)))))((((.(....).))))))))))..

>strand_D
gGCCACCUGACagUCCUCUCC
(((((((((((.[..((((((

>strand_E
gGAGAGAGAAGUCAACCAGAGAAACACACCAACCCAUUGCACUCCGGGUUGGUGGUAUAUUACCUGGUACGGGGGAAACUUCGUGGUGGCCG
))))))....))))(((((.....].(((((((((..........))))))))).........)))))(((((......)))))))))))).