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Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
3ZND
NA2310
A, V, W, X, Y
1
RIBOSOME
X-Ray Difraction
3.1
2013-02-13
model 1
>strand_A
UUUGUuGGAGAGUUUGAUCCUGGCUCAGGGUGAACGCUGGCGGCGUGCCUAAGACAUGCAAGUCGUGCGGGCCGCGGGGUUUUACUCCGUGGUCAGCGGCGGACGGGUGAGUAACGCGUGGGUGACCUACCCGGAAGAGGGGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACCCGCCCCUUGGGGUGUGUCCAAAGGGCUUUGCCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCGGUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGCGCAAGCCUGACGGAGCGACGCCGCUUGGAGGAAGAAGCCCUUCGGGGUGUAAACUCCUGAACCCGGGACGAAACCCCCGACGAGGGGACUGACGGUACCGGGGUAAUAGCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGGCGUGUAGGCGGCCUGGGGCGUCCCAUGUGAAAGACCACGGCUCAACCGUGGGGGAGCGUGGGAUACGCUCAGGCUAGACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGAUGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACCGGAUUAGAUACCCGGGUAGUCCACGCCCUAAACGAUGCGCGCUAGGUCUCUGGGUCUCCUGGGGGCCGAAGCUAACGCGUUAAGCGCGCCGCCUGGGGAGUACGGCCGCAAGGCUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAGGCCUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCACAGGUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGGGACUGCCCGCGAAAGCGGGAGGAAGGAGGGGACGACGUCUGGUCAGCAUGGCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCCCACUACAAAGCGAUGCCACCCGGCAACGGGGAGCUAAUCGCAAAAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCCGACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUCAGCCAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAACAAGGUAGCUGUACCGGAAGGUGCGGCUGGAUCACCUCCUUUCU
-----....((((..[.[[[..)))).((((.(((((..((.((((((....((..(((..(((..((.(((((((...........))))))).)))))......(((......((((((((..((...((.(..(.(((((....((((((....)))))).....)))))....((.(.(((........))).).))................).).))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(.(((............))).).(((......)))...))).)).).....(.((....(.............).))).)).))).))...(((......((........)).....)))......((((...(.....(.........)......)....)))).......(((((.[[...(((((.....((.]].)).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((..(((((((.(......((((((.....))))))....).))))))..).)))))))..((((((((....(((((((.....((.(((....((........)).......))).))............((....)).)))))))...)))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(.((((((((...)))))))).)...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((.(..(((((((.((......((........))...........(..(.(..(...(..((.......((.((....)).))......................))..))..(.(((....((....(....(((((((((....)))..((((......))))..)))))).....(.((.((((......(..............)........))))......((........)).........)).).....).....)...)..)))).....).)..)....))..))))))).(...(((((((.....((.......(.((....)).).........)).....)))))))......(....((.((((........)))).))....)..)..).))).....(((((((..........)))))))......))...)))))))))).))..(.(..((...((((.(((..(((((((((((((...(.((((....(.(....).).)))).)..)))))))))))))..))).))))....))...)..)..((((((.((....)).))))))}..-------------
>strand_V
gGGCCCUUAGCUUAGUCUGGUUAAAGCGAUCGGCUcAUAACCGAUUGGGCGCUGGUUCGAAUCCGGCAGGGCCCACCA
.((..((....((..........))...(((((...[[..)))))......((((.......)))).))..)).....
>strand_W
gGGCCCUUAGCUUAGUCUGGUUAAAGCGAUCGGCUCAUAACCGAUUGGGCGCUGGUUCGAAUCCGGCAGGGCCCACCA
..(........(.............)..(((...........))).......(((.......))).......).....
>strand_X
GGCAAGGAGGUAaAAAUAAUAAAA
------------...]].[[....
>strand_Y
gGGCCCUUAGCUUAGUCUGGUUAAAGCGAUCGGCUcAUAACCGAUUGGGCGCUGGUUCGAAUCCGGCAGGGCCCACCA
...((.(.....(......{...)...((((((...]]..)))))).....(.((..}....)).).).)).......
