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Institute of Computing Science
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Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
3J2C
M, N, O
1
RIBOSOME
Electron Microscopy
13.2
2012-09-28
model 1
>strand_M
gCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGGGCCU
(.((...(..((((...((((((..(.......((........))...........((((.(..(....((.(((..(.(((((....))))).)....(....)...))).).).).((.(((....((.((.......(((((((......))...(((......)))...)))))........((.((((..(...((..((.......))))....)..))))..(....(.(.....).).......)..)).........).).)...)..)))))....).)))).....)...)))))).(...(.(((((.....(((..((...((......))...))....))).....))))).)......(....((((.((........)).))))....)..)...)))).....(((((((.........)))))))......).....)).)..
>strand_N
aAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGAAGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGG
.......((((..[.[[[..))))..((..(((((..(((((((((....(((.(((...(...((.((..(...(.((.(....).)).)....)))..)).).......(.(.......((((((..(....((((((..(.(......((((((....)))))).......).).....(((....)))....((.((...(......).)).))..))))))...).)))))).(((....(((..(((((((.........))))))))))......)))..((((((((....))))...))))).).(((((............)))))..(((....)))....)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))...(.(((((...(....((((.(..........)..)))).....)....)))))....)..((((([[[...(((((.....((.]]])).......))))))))))..))))).))............(..[...(.((.(...((...((((((.((((..((((......((((((.....))))))....))))..))..))))))))....((.(((((...(((((((.(..((((((((...((........))......))))))))...).......((....)).)))))))..)))).).))....))...).))....(((((....((...(((...........)))...)).)))))......{....(((((..((((.(((((((.....))))))).))))...((..].)).....))))).).)..(((......((.(....).))....)))...]]].]..((....
>strand_O
uGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAACCUGCGGUUGGAUCA
.)).....(.(..((...((((.(((..((((((((((((.....(((((..(((..((....)).))).)))))....))))))))))))..))).))))....))...)..)...((((((((....)))))))).}.....
