You are 4283254 visitor.
Currently 7 users online.


Sequence & secondary structure in dot-bracket notation
       
 PDB id   NDB id  Strands     Number of models     Functional class     Experimental method     Resolution [Å]     PDB deposition
3J0V A, B, C, D1RIBOSOMEElectron Microscopy14.72011-12-07

model 1
>strand_A
aAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGAAGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGuGCCAGCAGCCgCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUgcAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGgCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCGUcACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGuAACAAGGUAACCGUAGGgGaaCCUGCGGUUGGAUCACCUCCUUA
........((((....[[[..)))).((....((((..(((((.(.(....(((.(((..(((..((.((..(((..((((......))))...)))))..)))))........(.......((((((..((...((.((((.(.((.....((((((....))))))......)).).....(((....)))....(.((((...(....).)))).).)))).))..)).)))))).(((....(((...((((((.........)))))).)))......)))..(((.((((....))))....))))...((.((............)).)).((((....))))...)))))).).....(.(((...(((((....)))).)))))..)..)))))..((((......(.((....)).).....))))...(.(((((..((....((.....(.......).....)).....)..).)))))....)..((((([[[...(((((.....((.]]])).......))))))))))..))))...))..........((([[...(.((((...(((.(((((((.((.((.(((........(((((.....)))))......))).))...)))))))))..((.((((.(...((((((((...((((((((...((........))......))))))).)..).......((....)).)))))))..).).))).)..))))...))))....(.((((...(....((((.........))))....))))).)..........(.((((..(((((.((((((.....)))))).)))))...((..]])).....)))).))))).(((......((((....))))....)))...]]]..(.(((.(((((((.((..(((((..(((((.((((......(..........)..........((((.((..(...(((((((..(((((((....)))))))...(......)..))))).))).((..((...(.((((.(....(((((((((....)))..((((......))))..))))))......(((..((.(.(...((..(((.....)))))....).).))...(...(.((.....)).)......)..)))......).).)))....).)).))....)).))))...)).)).))))).(...(((((((.....(.(..((.....(....).....))....).).....)))))))......(....(((((((........)))))))....)..)..))))).....((((((...........))))))......))...))))))))))..)..(.(.((.(.((((.(.....((((((((((.....((((.(...((..((....)).))..).))))....)))))))))).....).))))..).))...)..)..(..((..((....))..))..)..............
>strand_B
aGGGGCGuAGUUCAAuuGGuAGAGCACCGGUcUCCAaAACCGGGUgUUGGGAGuuCGAGUCUCUCCGCCCCUGCCA
(((((((..((.(........).)).(((((..[[[..)))))......(((.........))).)))))))....
>strand_C
aGGAUAAGUGCAUUAUGUUUAUGUGGUGAUUUGCCCUUCUGUAGCCA
....................{{{]]].....................
>strand_D
cGCGGGGuGGAGCAGCCUGGuAGCUCGUCGGGcUCAUAACCCGAAGAUCGUCGGuuCAAAUCCGGCCCCCGCAACCA
.((((((..((((.........)))).((((...}}}...)))).....(((((.......))))))))))).....