Search
Structural elements
Secondary structures
Help
About
References
Links
You are
4279274
visitor.
Currently
12
users online.
Supported by:
Institute of Computing Science
,
Poznan University of Technology
Institute of Bioorganic Chemistry
,
Polish Academy of Sciences
Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
3BBO
A, B, C
1
RIBOSOME
Electron Microscopy
9.4
2007-11-09
model 1
>strand_A
uUCAAACGAGGAAAGGCUUACGGUGGAUACCUAGGCACCCAGAGACGAGGAAGGGCGUAUUAAUCGACGAAAUGCUUCGGGGAGUUGAAAAUAAGCAGAGAUCCGGAGAUUCCCGAAUAGGUCAACCUUUCGAACUUCUGCUGAAUCCAUGGGCAGGCAAGAGACAACCUGGCGAACUGAAACAUCUUAGUAGCCAGAGGAAAAGAAAGCAAAAGCGAUUCCCGUAGUAGCGGCGAGCGAAAUGGGAGCAGCCUAAACCGUGAAAACGGGGUUGUGGGAGAGCAAUACAAGCGUCGUGCUGCUAGGCGAAUCAGUGGAGUGCGGAACCCUAGAUGGUGAAAGUCCAGUAGCCGAAAGCAUCACUAGCUUAUGCUCUGACCCGAGUAGCAUGGGGCACGUGGAAUCCCGUGUGAAUCAGCAAGGACCACCUUGCAAGGCUAAAUACUCCUGGGUGACCGAUAGCGAAGUAGUACCGUGAGGGAAGGGUGAAAAGAACCCCCAUCGGGGAGUGAAAUAGAACAUGAAACCGUAAGCUCUCAAGCAGUGGGAGGGGGACCAGACCCUGACCGCGUGCCUGUUGAAGAAUGAGCCGGCGACUCAUAGGCAGUGGCUUGGUUAAGGGAACCCACCGGAGCCGUAGCGAAAGCGAGUCUUCAUAGGGCAAUUGUCACUGCUUAUGGACCCGAACCUGGGUGAUCUAUCCAUGACCAGGAUGAAGCUUGGGUGAAACUAAGUGGAGGUCCGAACCGACUGAUGUUGAAGAAUCAGCGGAUGAGUUGUGGUUAGGGGUGAAAUGCCACUCGAACCCAGAGCUAGCUGGUUCUCCCCGAAAUGCGUUGAGGCGCAGCAGUUGACUGGACAUCUAGGGGUAAAGCACUGUUUCGGUGCGGGCCGCGAGAGCGGUACCAAAUCGAGGCAAACUCUGAAUACUAGAUAUGACCUCCAAAUAACAGGGGUCAAGGUCGGCCAGUGAGACGAUGGGGGAUAAGCUUCAUCGUCGAGAGGGAAACAGCCCGGAUCACCAGCUAAGGCCCCUAAAUGACCGCUCAGUGAUAAAGGAGGUAGGGGUGCAGAGACAGCCAGGAGGUUUGCCUAGAAGCAGCCACCCUUGAAAGAGUGCGUAAUAGCUCACUGAUCGAGCGCUCUUGCGCCGAAGAUGAACGGGGCUAAGCGGUCUGCCGAAGCUGUGGGAUGUAAAAAAACAUCGGUAGGGGAGCGUUCCGUGUUAGGGAGAAACGCGUGCGUGAGCCGCGUUGGACGAAGCGGAAGCGAGAAUGUCGGCUUGAGUAACGCAAACAUUGGUGAGAAUCCAAUGCCCCGAAAACCUAAGGGUUCCUCCGCAAGGUUCGUCCACGGAGGGUGAGUCAGGGCCUAAGAUCAGGCCGAAAGGCGUAGUCGAUGGACAACAGGUGAAUAUUCCUGUACUACCCCUUGUUGGUCCCGAGGGACGGAGGAGGCUAGGUUAGCCGAAAGAUGGUUAUCGGUUCAAGGACGCAAGGUGACCCUGUUUUUCAGGGUAAGAAGGGGUAGAGAAAAUGCCUCGAGCCAAUGUUCGAGUACCAGGCGCUACGGCGCUGAAGUAACCGAUGCCAUACUCCCAGGAAAAGCUCGAAAGACCUUCAACAAAAGGGUACCUGUACCCGAAACCGACACAGGUAGGUAGGUAGAGAAUACCUAGGGGCGCGAGACAACUCUCUCUAAGGAACUCGGCAAAAUAGCCCCGUAACUUCGGGAGAAGGGGUGCCCCCUCACAAAGGGGGUCGAAGUGACCAGGCCCGGGCGACUGUUUACCAAAAACACAGGUCUCCGCAAAGUCGUAAGACCAUGUAUGGGGGCUGACGCCUGCCCAGUGCCGGAAGGUCAAGGAAGUUGGUGACCUGAUGACAGGGGAGCCGGCGACCGAAGCCCCGGUGAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCCGCACGAAAGGCGUAACGAUCUGGGCACUGUCUCGGAGAGAGGCUCGGUGAAAUAGACAUGUCUGUGAAGAUGCGGACUACCUGCACCUGGACAGAAAGACCCUAUGAAGCUUUACUGUUCCCUGGGAUUGGCUUUGGGCUUUUCCUGCGCAGCUUAGGUGGAAGGCGAAGAAGGCCCCCUUCCGGGGGGGCCCGAGCCAUCAGUGAGAUACCACUCUGGAAGAGCUAGAAUUCUAACCUUGUGUCAGGACCUACGGGCCAAGGGACAUUCUCAGGUAGACAGUUUCUAUGGGGCGUAGGCCUCCCAAAAGGUAACGGAGGCGUGCAAAGGUUUCCUCGGGCCGGACGGAGAUUGGCCCUCGAGUGCAAAGGCAGAAGGGAGCUUGACUGCAAGACCCACCCGUCGAGCAGGGACGAAAGUCGGCCUUAGUGAUCCGACGGUGCCGAGUGGAAGGGCCGUCGCUCAACGGAUAAAAGUUACUCUAGGGAUAACAGGCUGAUCUUCCCCAAGAGUUCACAUCGACGGGAAGGUUUGGCACCUCGAUGUCGGCUCUUCGCCACCUGGGGCUGUAGUAUGUUCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGUGAGCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCAUAUCCGGUGUGGGCGUUAGAGCAUUGAGAGGACCUUUCCCUAGUACGAGAGGACCGGGAAGGACGCACCUCUGGUGUACCAGUUAUCGUGCCCACGGUAAACGCUGGGUAGCCAAGUGCGGAGCGGAUAACUGCUGAAAGCAUCUAAGUAGUAAGCCCACCCCAAGAUGAGUGCUCUCCUA
(((((.........(((((((((...........(((.((...(..........(.(.......[..)........(((.....((]......))........))).....)......(((....)))(..)....((.(((.........))).))..........(((((......(...[..).......)))).).........(......)...(((((......(.]...).....)))))........------------------------.................((..(...(.(....(.(.......).)..........((.......))....).).....)..)).............------.....((((((((.........)))))))).......((((..{.{{))))............)....)).)).)................((....))...............(((......)))...................)))))))))........((((..(.((........)))..))))...................((((.......(.(((((.(((..(((...((.......))...)))...(......)..(.((.....)).)....))).))))).)....((.(.....((.........(((((((..((.(...((((((......))))))...)..))...((....((..........))...))....)))))))......((.....)).........))........).))..((((((....(((((....)))))...(((((......(((................(.(..(.........------..........)..).)................))).-------------------..(..).)))))......(((((................)))))....((........))...(((...(....((([[[.....(.((((...........((.....(..(((........(.(.(.(.....(...........).....).........(........)...).).)....)).).)....))..........]]].....)))).).)))....)..))).(.(........).).....))))))......((....(......(((((.((....)))))))....)...)).............)))).(......((.......((((.......))))...(.......(.....(....((.((...((.....)).)).)).......(((...(...(......((....))......)...)....(((((........)))))....((..(.((................(....(....(((((((((.....[[[..)))))(...(((.......(-----------------------..(((.........)))....)......)))....)(...((((....))))....))))).....).....)..........................)).)...))...)))..)......((......))...)..(..(.....)..)....)...((((....(((.((.(..................((((.....(....)......))))(((((.........)))))(...).......((((....(...((.........)).....(((((.....(.(....).).......)))))....(.(...(...((.((((..(((...((..((((.......(....)........))))..))...)))))))...)).).(.((...........)).)........(............(((.(.....).)))......).....).)...).....))))........).)).))).)))))).....).....(((((........)))))..(((((((...(...(.......(...(..((...((.(...(((((((......(..(((..((((...........((..............((...((.......))...))....................))..))))..)))..).......(.....(((..........)))....).....)))))))....).))..(........[..)((.((...........].)).)).[.....((((((....(((.((.......)).))).......]...[[.......))))))...(((.....(...<..).....)))..((....))....]]........(((.((..((..}}.}..)).)).)))......>.......))....)..).........((.....((.((.................)).))......)).........(((((.(.(......((..(((........)))....))....((.......))..........)...)...))).))....(....((....)).....)....)....)..)))))))....(((((.(...(.((....(((((.....(....)....)))))....((((...((((...((.((((((((]]].))))))...)).))...)))).)))).....((....(.(...............).)....))..)).).......).)))))....
>strand_B
uUCUGGUGUCCUAGGCGUAGAGGAACCACACCAAUCCAUCCCGAACUUGGUGGUUAAACUCUACUGCGGUGACGAUACUGUAGGGGAGGUCCUGCGGAAAAAUAGCUCGACGCCAGG
.(((((.(......(..(((.......((.(.................)...))......)))...)..........((.(.(........).).)).............).)))))
>strand_C
gAAGGUCACGGCGAGACGAGCCGUUUAUCAUUACGAUAGGUGUCAAGUGGAAGUGCAGUGAUGUAUGCAGCUGAGGCAUCCUAACAGACCCACAGACUUGAAC
...((...(.(.........).)..............(.((((...((......(((....))).....))....))))..)......)).......))))).
