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Institute of Computing Science
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Poznan University of Technology
Institute of Bioorganic Chemistry
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Polish Academy of Sciences
Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
2WDK
2WDK
A, V, W, X, Y
1
RIBOSOME
X-Ray Difraction
3.5
2009-03-24
model 1
>strand_A
UUUGUuGGAGAGUUUGAUCCUGGCUCAGGGUGAACGCUGGCGGCGUGCCUAAGACAUGCAAGUCGUGCGGGCCGCGGGGUUUUACUCCGUGGUCAGCGGCGGACGGGUGAGUAACGCGUGGGUGACCUACCCGGAAGAGGGGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACCCGCCCCUUGGGGUGUGUCCAAAGGGCUUUGCCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCGGUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGCGCAAGCCUGACGGAGCGACGCCGCUUGGAGGAAGAAGCCCUUCGGGGUGUAAACUCCUGAACCCGGGACGAAACCCCCGACGAGGGGACUGACGGUACCGGGGUAAUAGCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGGCGUGUAGGCGGCCUGGGGCGUCCCAUGUGAAAGACCACGGCUCAACCGUGGGGGAGCGUGGGAUACGCUCAGGCUAGACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGAUGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACCGGAUUAGAUACCCGGGUAGUCCACGCCCUAAACGAUGCGCGCUAGGUCUCUGGGUCUCCUGGGGGCCGAAGCUAACGCGUUAAGCGCGCCGCCUGGGGAGUACGGCCGCAAGGCUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAGGCCUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCACAGGUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGGGACUGCCCGCGAAAGCGGGAGGAAGGAGGGGACGACGUCUGGUCAGCAUGGCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCCCACUACAAAGCGAUGCCACCCGGCAACGGGGAGCUAAUCGCAAAAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCCGACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUCAGCCAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAACAAGGUAGCUGUACCGGAAGGUGCGGCUGGAUCACCUCCUUUCU
-----....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((.............)))))).)))))......(((......((((((((..((...(((((((.(((((....(.(.(......).).).....)))))....((((.((.((....)).)).))))...(.((...)).).)))))))..))))))))))(((.....((..((((((((.......)))))))))).......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))...((.......((((....))))......)).....(((((...(....((((.....)))).....)....)))))......(((.([[[...((((......((.]]]))........))))).)))..)))))))))..........((([[...(.((((...(((.(((((.(.((((((((.(......((((((.....))))))....).))))))..))).)))))..(((((((((...((((((((...(((((((....((........)).......)))))))...)........(....)..)))))))..))))).)))..))))...))))....(((((....((...((((.........))))...)).)))))......{...((((((..((.(((((((...))))))).))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](.(((.(((((((.((..(((....((((((((((......((........))..........((..(((..(...((.(..(...(.(((.(....).))).)....................)).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.((((..(...(..............).....)..)))).....(((........)))........)))).....).).)))...)).)))))....)))..))...)).)))))))).(...(((((((.....(((......((((....))))........))).....)))))))......(....(((((............)))))....)..)....))).....(((((((..........)))))))......))...))))))))))..)..(.(..((.(.((((.(((..(((((((((((((...(..(((....(((....))).)))..)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..-------------
>strand_V
gCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCACCa
(((((((..((((.....{..)))).(((((..[[[..))))).....(((((..}....))))))))))))....
>strand_W
gCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCACCA
((((.((....(...........)..(((...........))).....((((.........)))))).))))....
>strand_X
aAAAUUCUUCA
....]]][[[.
>strand_Y
gCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCACCa
..(((((...(.(........).)...((((..]]]..)))).......(((.........))).)))).).....
