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Supported by:
Institute of Computing Science
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Poznan University of Technology
Institute of Bioorganic Chemistry
,
Polish Academy of Sciences
Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
1VX6
A, B, C
1
RIBOSOME/INHIBITOR
Electron Microscopy
3.2
2014-06-02
model 1
>strand_A
GUUUGAUUUgAUGUUAGGAGGGCAAAUCCGCCGAAUUUAAGCAUAUAAUUAAGCGGAAGAAAAGAAAAUAACUAUGAUUCCUUUAGUAACGGCGAGUGAACAAGGACCAGCUCAAACGGUUAAUCCUUCGUUUGGUGCAAACCUUUCGACGGAAUUGUCGUUGAAUUAUUCCAUGAAUGCCUUUAAUUUGAGCAAAGUGAGCAGGAAUGCUUCCCCAUAGAGGGUGAAAGGCCCAUAGUUCUUUUUAAUUUAUUCAUUGGAAUUUUUCAUGUCGAGUCGUGUUCUUUGAGAUUGGAGCACUAAUACGUGUGAUACAUUUCACAUAAAGCUAAAUAUAUGUAGGAGACCGAUAGCAAACAAGUACCGUGAGGGAAAGAUGAAAUAGUACUCAGGAAUGAGCAAUUAAAUAGUACCUGAAAUCGUUAAGAUGGAACGGAUUAAGAGAGAAAACAAGUAAAGAGGGGAAUUUUUAAUUUUUUUUGUUAUAAUUCUCUUCUUUAUUAAAAGAAACAUCAGUGAUUAAUUUAAUUUCAAUAAAGCAAUCCCCUGAAAUUCAAAAUUUCUUUUAAUUUUGUUUUCACUUUCUCCCCGCACUAAUGUGGGGAAAACUGGCUUUAUUUCUUCAAUUAUUUUUUUUGCUGAGGAAUUUUAAAAUUAUUUGAAUUUUUCUUCUUAUAAUUUAAGUUGUUUCUAUACAGUACUUUCUUAACCCACUCGUCUUGAAACACGGACCAAGGAGUCUAGCAAAUGUGCAAGUGUAUAUGAUUCUUUAAACAUUUCUCUUUUUAAUAUACGCAUAAUUAAUGUAAUAUGUUUUCUUCAUUGUAGAUUUGUGGUGUUUAAUUUUUAUUAAAUCCCCACUUUGCAUACAAUACCGGUAAGCAAUUAUGCUUUAUUGAGUACGAGCAUAUUUGGUAGGACCCGAGAGGCUUUGAACUAAGCGUGAUGAGAUUGAAGUCAGACGAAAGUCUGAUGGAGGAUCGAGUUGAUACUGACGUGCAAAUCGUUCAUUUCAAUCACGUUUAGGGGCGAAAGACUAAUCGAAAAGCCUAUUAGCUGGUUAUUUUCGAAAGAUCUCUCAGGAUCGCUGGAGUUGAUUAAUAUAAUUUUACCAGGUAGAGAUAAUGAUUAGAGGAAUCAGGGAAAUCGUUUUCCUUGACCUAUUCUCAAACUCCCAAUAGGUAAAAAGGGCGAAAUAACUCAAUUUGUAUUUCACUCAUAUUAAAUAAAAUAACUCCAAGUGGGCCAUUUUUGGUAAGCAGAACUGGCGAUGAGGGAUGCUCCUAACGCUUGGAUAAGGUGCCUAAAUAUUCGCUCAUGAGAUCCCAUAAAAGGUGUUGGUUCAUAAUGACAGUAGGACGGUGGUCAUGGAAGUCGAAAUCCGCUAAGGAGUGUGUAACAACUCACCUACCGAAUGAACUAGCCCUGAAAAUGGAUGGCGCUAAAGCGGAUUACCGAUACCAAGCCAUAAAAAGAACAGAAAAAAUUUAUUUUUUUUUUAGAAUCUUUUUAUGAGUAGAAAAUCGUGGGGUUUGUGUUGAAGCGAAAUACGUGAGUUUUCGUGGAACAUCUCCCUAGUGCAGAUCUUGGUGGAAGUAGCAACUAUUCAAAUGAGAACUUUGAAGACUGAAGUGGAGAAGGGUUUCUUGUCAACUGUGAUUGAACAAGAGUUAGCCGCUCCUAAGGGAUAGCUGAAAAGUGUUUAAAAGGGGGUUCCUUCCCCGUCUCAAAAGGGAAACAGGUUGAUAUUCCUGUGCCAAUAGUAUUAUGAGUUUCUUAGAUGGUAACAUAUAUAUAAAUGAACUCCUUUACAUAGGCUUUACACUCGGGGUGCGUUUUCUUUGCACUUUACCUUUAUAACAAACCUUGGAAUCAAUUUACUUGGAGAAGAGGUUCGUUGAACUCAAUUCAAAAAAUUUCUUGAACGGGGUUUUCGGAUUCAGUUCAUUUUAUUUUUUGUUUUGUAGCAAUAGUAAUUCGUUUUUAUGAAUUAUCCGAAGUGGUAAGGACUAUCCUUGAAAAAAGGAGGGAACGGCUUUGUAACUUGGUUUCUUCUGAUUCCAUUUUGCUUUGCUUAUACUCUUAAUACUUGUAUGAGCGUACCAACAACCGCAUCAGGUCUCCAAGGUUAACAGCCUCUGGUUAAAUAGAAAAAAGUAGGUAAGGGAAGUCGGCAAAAUAGAUCCGUAACUUCGGGAAAAGGAUUGGCUCUGAGGACAUUAGAAAAGAGAAGAAAAAAAGAGGGUCGAAAAUAAAAUUGCAGUCUUUAUUUGCUUUUCUUUCGAUUUGCUUGUAAUCUGCUUUUUCUUUUUCUUCUUUCUUUUUUUCUCCCCCUCUUUUCGCCUUCACUUUAUUGUAAUUUUAUUACUUUAAUUUGAUACCUAUAAUGUUAACUCAGAACUGAAACGGACAAGGGGAAUCCGACUGUUUAAUUAAAACAUAGCAUUGUGAAAAGCCACAACUGGUAUUAACACAAUGUGAUUUCUGCCCAGUGCUUUGAAUGUCAACUUGAUGAAAUUCAAUCAAGCGCAGGUAAACGGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUCUAAUUAGUGACGCGCAUGAAUGGAUUAACGAGAUUCCCACUGUCCCUACUUGCUAUCUAGCGAAACCACAGCCAAGGGAACGGGCUUGGCAAAAUCAGCGGGGAAAGAAGACCCUGUUGAGCUUUACUCUAGUCUGGCUUUGUGAAACGACUUAAGAGGUGUAGCAUAAGUGGGAGUAGAAACUGAAAUAUGUUUUUACGACAGUGAAAUACCACUACUUUUAAAGUUGUUUUACUUAUCCAUUUAUAGGGAAAUAUAUUAUGCUUUAUCCUUCGGGAAGGCAUUCUGAUAUUAUUUGAAUUUUUAAGAAACUUGUUUCUUAUCUUUCUCCCAAUUUCUAUGGAGACAUAGCCAGGUGGGGAGUUUGACUGGGGCGGUACAUCUGUUAAAUAUUAACGCAGAUGUCCAAAGACAAGCUCAAAGAGAACAGAAAUCUCUUGUAGACUAAAAGGGGAAAAGCUUGUUUGAUUUCUAUUUUCAGAACAAGUAGAAAACGUGAAAGCGUGGCCUAUCGAUCCUUUAUAUUUGCAAAAUGACGUAAAUUACUUACUACUGUGCAUAUAGAGGUGUCUGAAAAGUUACCACAGGGAUAACUGGCUUGUGGCUGCCAAGCGCUCCUAGCGACGUAGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCUAUCAUUGGGACGCAGAAGUCUCAAAGUGUCGGAUUGUUCACCCGCUAAUAGGGAACGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACUGAUGAAUUUUAUUAUAUUUUUUAUAUAUACAUAUAGUAUUGUGACAGUAAUCCAACUUGGUACGAGAGGAUUAGUUGGUUCAGACAAUUGGUACAGCAAUUGGUUGACAAACCAGUGUUGCGAAGCUAAGUCUGUUGGAUAAUGGCUGAACGCCUCUUAAGCCAGAAACCAUGCUGAUUAAACAAUACUAUUUCGUUCUUUUUUGUUUCCUUUUUUACUGCUAAUGUAAAAGAGAAAUUAUAUAUGUACCUUUUUUUGGUACAUAAAUAAUCCUAUCACCUUUUUCGUGAGCUGUGAGCUGUGAGCUAGGCAAUAGUUCUUUAACAACAAAAAAGAAUUGCACAAACUGUAGACGACUUUUUUGCCUCAGGGUGCUGUAAACAUGAAAGUAAACUUUGUUUUACGAUCUGUUGAGGCUUAUCCCUAGUGGUAAAGUGUUU
---------..((.((((((.((...(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...((....((((.((.....(......).....)).)))....)))..(((..(((((..((((....((((....(.(...({(..(......)..))[[(...).(((....}]])))...).)....))))...))))...)))))..))).....)....(((((((........)))))))......(((((..[[[[[[)))))..)))........((((((((.((...............((....))....((.......(..((((....))))...(......)..)(.....((((((((((.....((.(((((((.(.......((((((((((((..--------------------..))))))))))))....(((((((.((((((..((...(((...((((((((.......(.(..-------------------......).).(((.((((((..(....))))))))))...))))))))......)))...))..))))))...........((((((..(((......)))..)))))).....)))))))........).))))))).)).[((.(........).))((((((....(((.(((((((((..(((...(((..........)))..------------..)))...((....))......---..--..(((((......((--------------------...)).......)))))(((((((((((..--..))).))))).)))...))))))))).)))..((.(...((((((.....((((((((((.((((...((((((......))))))...).)))....((..((.((.......<)))).))...).))))))))).(.((.......))...)..))))))......).))..((((((.....((((....)))).(((((((((........((.(((((((.(...(((....(((..(.(.(.--((.((----------).))).).).)..)))..)).)...).)))))...(((.((((((.(.......))))))).)))......))))....))))))).))..((((.(((((.....))))).))))....(((......)))...((((((....((([[[...(.((((((......(..........(((.(((((((((.--------------------------------------------------------------------.))))))))))))..........]]].)....))))))))))....))))))(((((((((.--..((((((.-----.))))))......)))))))))....))))))(.(((....(((......((((((.((....))))))))...))).....)))..).....))))))((.....((.....((((((.......))))))((((.....((((..((...(((((....(.......)..)))))....[[(((.((...((((..(((....))).......--((((.-----)))).))))....))...(((((........)))))]]((..(((((((.(((..----.((((....))).........(.<.((((((...((((.((((.((((...((((((...{{..))))))(...((.....((.((((((.....(((.....))).....)))))).))......(((...((...----------------------------------------.))...))).))....).....(...-------.)........))).).)))).))))(...)....))))))...)).(......--------------------------.......)---.))).)))))))....)).)))..)).....((......)).)))).((((.....))))..))))...((((....((((((((.((..(....(.......(((((....(.[..).....)))))((.(((((((((((.--------------------------------------------------------------------------------------------------------------------------------------------------------------------.)))))..)))))).))(...).......(((((((((...((.........))...(((((((.....((((....))))......))))))).].(((.(((..((((((.....((....((((......))))....))..))))..))))).((((.........)))).........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....))....(((((.....]..)))))....(((((..(((.((......((((.((((((..(((((.((((((((..((((((.((((.(((((..(-----------------------------------------------------.).)))))..)))).))))))...((((......((.(--------------------------------------------.....>--------------------------).))..----..)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((][.[[[))....)))))))...(((((((((....{..))))))))).(((....))).))]]].].....((((((...(((.]]]]...((((.....))))....]]))).))))))....)}....))))..)))))).......((.(.(.((((((...((.......))...))))))...)).).)........((((.((((((..(((((((((......))))))..))).(((.(.....).))).....)))))..)...))).).....(((((((....))).))))..>.))..))).)))))......(((.((((-------))))..))).((((((((..((((.(.((((((.....(....)....)))))).)(((((...((((...((((((((((}}..)))))..)))))...)))).)))))..((....((((..............))))....))..)))).....)))))))).------(....(((((.-----------.[[[..(((....(.((.......((((((((-------)))))))).....)))......((..(((...-(((---)))...)))..).).............))))))))...).---((((.((..(.......)..))..(((.((((..(((....(((.((..((((..-----.))))..)))))...))).....))).).)))...))))--
>strand_B
UGACUCGUUCAUACUACAGUGGAUACACCAGAUCCCAUCAGAACUCUGAAGUUAAGCACUGUAAGGCUUGGCUAGUACUGAGGUGGGAGACCGCUCGGGAACACCAGGUGAUGAGUCAG
-((((((((....((((((((.....((.(((...(....)...)))...))....)))))).))((((((......(((((..((....)).))))).....))))))))))))))..
>strand_C
UAGCACAGUCUUAACGAUGGAUGUCUUGGUUCCUACAGCGAUGAAGGCCGCAGCAAAAUGCGAUACGCAAUGAAAAUUGCAGUGACUGUGAAUCAUCAGAAUGCUGAAUGUAAACUACACCAAUUCCCUUCGGGGAAUAGUGGUACUCCUACAGAAAAU
-]]]...)))))))))).....)))..))))))))))))......((((((.[[.....))).....(.((((..((.]].))...--....))))..)...)))....((.....))((((((((((.---))))))..)))).))))))))....--