RNA FRABASE - RNA FRAgments search engine & dataBASE

Sequence & secondary structure in dot-bracket notation

PDB id	NDB id	Strands	Number of models	Functional class	Experimental method	Resolution [Å]	PDB deposition
1S9S	1S9S	A	20	RNA	NMR		2004-02-05

models: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20

model 1, 2, 4, 5, 6, 8, 9, 10, 11, 13, 14, 16, 17, 19

>strand_A
gGCGGUACUAGUUGAGAAACUAGCUCUGUAUCUGGCGGACCCGUGGUGGAACUGUGAAGUUCGGAACACCCGGCCGCAACCCUGGGAGAGGUCCCAGGGUU
.((((..((((((....))))))..)))).....((....(((.(((((((((....)))))....)))))))..))((((((((((....))))))))))

model 3

>strand_A
gGCGGUACUAGUUGAGAAACUAGCUCUGUAUCUGGCGGACCCGUGGUGGAACUGUGAAGUUCGGAACACCCGGCCGCAACCCUGGGAGAGGUCCCAGGGUU
.((((..((((((....))))))..)))).....(((...(((.(((((((((....)))))....))))))).)))(((((((((......)))))))))

model 7, 15, 18

model 12

model 20

>strand_A
gGCGGUACUAGUUGAGAAACUAGCUCUGUAUCUGGCGGACCCGUGGUGGAACUGUGAAGUUCGGAACACCCGGCCGCAACCCUGGGAGAGGUCCCAGGGUU
.((((..((((((....))))))..)))).....((.(..(((.(((((((((....)))))....)))))))).))((((((((((....))))))))))